Department of Bioinformatics and Computational Biology

George Mason University

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Job Opportunities




Posted 12/28/08

Faculty Position: Mellichamp Chair in Systems Biology
UCSB

The University of California Santa Barbara seeks to hire a highly creative and productive individual to fill a Mellichamp Chair in Systems Biology. The opening has resulted from a philanthropic gift that has been generously donated by Duncan and Suzanne Mellichamp.

Candidates at all levels will be considered. The primary academic appointment will be in either Mechanical Engineering or Electrical Engineering, with a possible joint appointment in a related science department.

UCSB's core strengths in Systems Biology lie in the areas of multi-scale stochastic modeling and computation, control and dynamics in biological networks, and robustness analysis of gene regulatory networks. The Systems Biology program is supported and enhanced by a collection of interdisciplinary research and education centers, including the Center for Control Dynamical Systems and Computation, the ARO-sponsored Institute for Collaborative Biotechnologies, the California NanoSystems Institute, the NSF-sponsored Materials Research Laboratory, the NSF- sponsored Center for Bio-image Informatics and the Kavli Institute for Theoretical Physics.

Highly qualified individuals from all relevant disciplines in all areas of systems biology and synthetic biology are encouraged to apply.

Applications must be submitted electronically in PDF format to sysbio-me@engineering.ucsb.edu. Applications should contain a letter briefly outlining career plans, a statement of research and teaching interests, curriculum vitae, and names and contact information for 3 - 5 references. Address applications to:

Systems Biology Search
Department of Mechanical Engineering
University of California, Santa Barbara

Applicants are encouraged to submit their applications by January 31, 2009. However, the search will remain open until the position is filled.

We are especially interested in candidates who can contribute to the diversity and excellence of the academic community through research, teaching, and service. The University of California is an equal opportunity, affirmative action employer.




Posted 12/28/08

Tenure Track Positions: Math Department
University of Houston

The Mathematics Department at the University of Houston expects to fill five positions at either the assistant tenure track level or the tenure associate level. Candidates working in all areas of mathematical biology are encouraged to apply. The University of Houston takes part in a new Center for Mathematical Biosciences:
http://www.math.uh.edu/cmb/

We are particularly interested in mathematicians who can help foster collaborative efforts with existing research teams in our Department and the University at large, and whose research interests will continue to foster collaborative interactions at local Universities, as well as with Industry and the Texas Medical Center in Houston.

Successful applicants at the associate level will be expected to fill leadership roles in the department. They should have an established research program, a history of success in attracting external funding, experience supervising graduate students, and strong communication and teaching skills.

The University of Houston is one of the most diverse research universities in the nation. It is an Equal Opportunity/ Affirmative Action employer. Minorities, women, veterans and persons with disabilities are encouraged to apply. Applicants should submit a letter of application, an extensive curriculum vita which includes a list of all scientific publications and a description of their current research interests. They should have 4 letters of recommendation (at least one of which addresses their qualifications as a teacher and advisor), sent directly by their references.

All application materials should be sent to:
Hiring Committee
Department of Mathematics
University of Houston
4800 Calhoun Road
Houston, TX 77204-3008




Posted 12/28/08

Postdoctoral Research Assistant
University of Oxford

Postdoctoral Research Assistant at the Control Engineering - Systems Biology Interface

Department of Engineering Science, University of Oxford.

Applications are invited for the above post which is available for up to 8 months in the Department of Engineering Science at the University of Oxford. This post will involve working in Systems Biology from a Control Engineering perspective. The position suits a theoretician with a control engineering, mathematical or computer science background. The aim is to use control engineering tools to understand the design principles and robustness properties of different feedback mechanisms in the chemotaxis network of the bacterium R. sphaeroides. This signal transduction network has an interesting feedback structure which can be understood from a control engineering perspective. The successful candidate will become part of the growing and flourishing inter-disciplinary environment in Oxford working in Systems Biology. The work will be partly mathematical, partly computational and will involve close interaction with researchers in Biochemistry.

You should have a good first degree and have completed or are about to complete a doctorate in Engineering, Mathematics, Computer Science or a related subject. A good publication record in internationally peer-reviewed journals commensurate with stage of career is expected, and evidence of previous research experience in Systems Biology is an advantage. The ability to carry out independent research and to develop mathematical algorithms and simulations in MATLAB is required. Experience of working in a team, a demonstrated ability to write clear, correct, concise English and make clear, well illustrated presentations of scientific material are all desirable.

The starting salary will be in Grade 7 £28839 - £2970

Further particulars (http://www.eng.ox.ac.uk/jobs/fp/DF08075fps.pdf) and personal details form (http://www.eng.ox.ac.uk/jobs/fp/personal_details_form.pdf) may also be obtained by telephoning 01865 273013 or by email to administrator@eng.ox.ac.uk to whom written applications should be made enclosing a curriculum vitae and a fully completed personal details form. Your letter should explain your interest in and relevant experience for this job.

Please quote DF080075 in all correspondence.

The closing date for applications is noon 6th January 2009.

The University is committed to equality and valuing diversity (http://www.admin.ox.ac.uk/eop/policy/cop.shtml).




Posted 12/28/08

Postdoc Position: Large-Scale Ecosystem Functioning
Stellenbosch University

Understanding the effects of climate change and land use on ecosystem functioning is a challenging question addressed by the team of environmental and biological scientists on the BIOTA-AFRICA project (www.biota-africa.org). As part of the BIOTA-Southern Africa (Phase III) project, this post-doctoral fellowship will entail analyzing the long-term data collated over the past 8 years from 35 observatories and 800 sub-sites across the southern African transect (from Cape Point, South Africa, to Caprivi, Namibia). Specific questions involved in the project include (1) relationships between abiotic factors (e.g. soil nutrient content and habitat heterogeneity) with ecosystem structure and community composition (e.g. woody cover and species turnover); (2) the influence of land use on soil respiration and therefore ecosystem productivity; (3) spatial and scaling patterns of species and soil type distributions; (4) spatiotemporal modelling of the plant-soil interactions under the current climate change regime.

Preference will be given to candidates with strong skills in large-scale data analysis using GIS and statistical multivariate methods. The candidates will also be able to publish the output in peer-reviewed journals. The German Federal Ministry of Education and Research is offering a commencing fellowship of an amount of R120,000 for 2009, and the position will be based in Stellenbosch University, South Africa. In addition to the fellowship, the successful candidate will also be provided with a laptop computer and other research equipment. Subsistence and transport costs during research expeditions will be covered. The post-doc will work under the supervision of Dr. Cang Hui (DST-NRF Centre of Excellence for Invasion Biology) and Dr. Anthony J. Mills (Department of Soil Science).

A detailed CV, project outline (one-page maximum) and one/two publication reprints, together with contact details of two references, should be sent by email to chui@sun.ac.za and mills@sun.ac.za by the end of February 2009. The candidate should be able to start in the first quarter of 2009




Posted 12/28/08

Bioinformatics Postdoc
Astra Zeneca Oncology, Amsterdam

Topic:
Pathway-based tumour characterisation by alignment against cell panels along multiple molecular dimensions.

Research:
Astra Zeneca Oncology has constructed large cell panels to serve as in vitro models for drug response. These cell panels have been extensively characterized by mutation analysis, mRNA expression, aCGH, response to a wide variety of drugs, micro-RNA expression and phosphoprotein characterization. In parallel, the same measurements are being performed on a collection of colorectal samples. In this project two aims are pursued. First, a comparative analysis will be performed between the cell line data and the tumor data to determine the multi-dimensional molecular states spanned by the cell lines and whether these states faithfully recapitulate the space spanned by a representative and clinically relevant selection of tumor samples. Guided by this mapping and by following a pathway-based approach, integrative modeling will be applied on the cell line panel data to construct models predictive of resistance.

Job description:
The successful candidate will be responsible for the bioinformatics analysis of the cell line and tissue data. More specifically, these tasks include 1) constructing a comprehensive gene list of the PI3K and ERK network; 2) Molecular characterisation of the colorectal cell panel and tumour samples through integrative analysis of the various data sources within the space spanned by the identified network genes and 3) Pathway-based alignment of cell panel to tumours to determine the extent to which the cell panel recapitulates the heterogeneity in the tissue set.

Location:
The position is embedded within the Bioinformatics and statistics group lead by Dr Lodewyk Wessels (http://bioinformatics.nki.nl) at the Netherlands Cancer Institute, Amsterdam and the Oncology Informatics group, Discovery Medicine, Astra Zeneca, Alderley Park, UK lead by Dr Tim French. We plan to have regular meetings, and the postdoc will also spend time at both locations.

Requirements:
Candidates should fulfill the following criteria

Conditions of Employment:
The successful candidate will be employed by the Netherlands Cancer Institute. The employment conditions follow general employment rules as laid down in the 'CAO' for hospitals. The salary will be determined depending on education and experience.

Contact and Applications:
Dr. Lodewyk Wessels, tel. +31 20 512 7987 or e-mail: l.wessels@nki.nl or Dr Tim French Discovery Medicine, Cancer Bioscience, tel. +44 1625-519922 or e-mail: Tim.French@AstraZeneca.com. Applicants should send a CV, list of publications and the names and addresses of at least two persons that can be approached to obtain further information.

Website:
http://bioinformatics.nki.nl

Closing date:
30 January 2009




Posted 12/28/08

Postdoctoral Fellow: Mathematics of Collective Behaviour
University of Sydney

Postdoctoral Fellow in Mathematics of Collective Behaviour
Schools of Biological Sciences and of Mathematics and Statistics
Faculty of Science

Reference No. 145106

The Faculty of Science is a leading provider of education across the spectrum of the sciences. It offers a diverse range of specialisations, research programs and facilities, and an extensive liaison with international institutions. The Schools of Biological Sciences and Mathematics and Statistics are a core part of the Faculty dedicated to producing world-class research teaching and research programs in Biology and Mathematics.

The Schools are currently seeking a results-driven Postdoctoral Fellow to conduct research into a project that will investigate how different nest-site requirements have shaped collective decision-making processes in two species of honey bee. In recent years nest-site selection by colonies of insects has served as a model system to study the speed-accuracy trade-off in decentralised decision-making systems.

This project will investigate the speed-accuracy trade-off in the cavity nesting western hive bee Apis mellifera and the open nesting red dwarf bee A. florea. Both regularly need to select a new nest site and both need to come to a decision quickly while selecting the most appropriate site. However, due to their fundamentally different nest site requirements (a cavity in a tree versus a shaded branch) natural selection has shaped their respective speed-accuracy trade-offs in different ways to ensure the best possible outcome for each species.

For more information about the position please visit:
http://positions.usyd.edu.au/steam145106email

For specific information about the position, please contact Associate Professor Madeleine Beekman by email: mbeekman@bio.usyd.edu.au or Dr. Mary Myerscough by email: m.myerscough@maths.usyd.edu.au

General enquiries can be directed to Fabrice Noëon (+61 2) 9036 7295 or by email: f.noel@usyd.edu.au

Closing Date: 5 February 2009




Posted 12/28/08

Postdoc Positions: Neurotechnology
Bernstein Focus for Neurotechnology

5 Postdoc-Positions in Neurotechnology Neurotechnology is a rapidly growing field of research, thriving to repair, replace or support physical functions affected by nervous system diseases by technical means.

At the Bernstein Focus for Neurotechnology (BFNT) we exploit electrical and chemical signals recorded in the brain to control external or implanted devices.

The BFNT efforts are organized in projects on fundamental neurotechnological research, the development of new techniques, clinical testing and neuroethical considerations.

Postdoc-Positions are available in the following projects:

Further details on: www.bfnt.uni-freiburg.de/jobs




Posted 12/22/08

Summer Student Positions
Argonne National Laboratory

There is still time for graduate students to apply for a 2009 summer research position as a Wallace Givens Associate at Argonne National Laboratory. Candidates must be in an accredited Ph.D. program in mathematics, applied mathematics, computer science, or a related field at a U.S. university. Givens Associates will work actively with MCS scientists designing, analyzing, and implementing numerical methods.

During the appointment period, participants receive a stipend of $4,000 to $4,200 per month, depending on experience level. Transportation expenses are reimbursed for one round trip between the Laboratory and the participant's home or university.

The first step in the application procedure is sending your current resumé as a .PDF file, along with having three letters of reference sent to Ms. Lisa Reed, Division of Educational Programs, Argonne National Laboratory, 9700 S. Cass Avenue, Argonne, IL 60439 (Lreed@dep.anl.gov). This material must be received at Argonne by February 2, 2009.




Posted 12/22/08

Postdoctoral Research Opportunities
National Institute of Standards and Technology (NIST)

The US National Research Council (NRC) Associateship Program is accepting applications for two-year appointments for postdoctoral research at the National Institute of Standards and Technology (NIST) in Gaithersburg, Maryland and Boulder, Colorado. Among the topic areas of interest are image analysis, dynamical systems, combinatorial and discrete algorithms, applied optimization & control, scientific data mining, immersive visualization, and parallel & distributed computing, as well as modeling and analysis in fluid dynamics, electromagnetics, materials science, computational biology, network science, and quantum information. For details see:

http://math.nist.gov/mcsd/jobs/postdoc.html.

Competition for postdoctoral awards across all NIST technical program areas is managed by the NRC. Applications must be submitted directly to the NRC; the deadline for applications is February 1. The NRC program at NIST is restricted to US citizens.




Posted 12/22/08

Computational Engineering Faculty Position
MIT

The MIT School of Engineering seeks an outstanding individual for a tenure-track position in the area of Computational Engineering at the assistant or untenured associate professor level. In exceptional circumstances more senior candidates will be considered. The position shall be associated with the "home" engineering department most suitable for the selected candidate.

Applicants must have earned a doctorate by the beginning of the appointment period in an appropriate field of engineering or mathematics or a related field; must have demonstrated the ability to carry out outstanding research; and must have shown strong promise for exceptional teaching.

All areas of computational engineering are of interest. Emphasis is on the development of new computational methodology with strong demonstrated relevance to important engineering disciplines and problems.

Faculty duties will include teaching at the graduate and undergraduate levels, research, and supervision of student research. The applicant is expected to teach graduate computational engineering material in the School of Engineering, and to teach undergraduate core disciplinary material in the designated home engineering department.

Interested applicants should submit application materials electronically at https://school-of-engineering-faculty-search.mit.edu/soe-compeng.adp. All applications received by March 15, 2009, shall receive full consideration. MIT is an equal opportunity/affirmative action employer. Women and minorities are encouraged to apply.




Posted 12/17/08

Chair in Computatinal Biology
Heriot-Watt University

Chair in Computational Biology - Ref 169/08/W

The Life and Physical Sciences Interface Theme at Heriot-Watt University wishes to appoint a Professor of Computational Biology.

The post is based in the School of Mathematical and Computer Sciences (MACS) and a major element of the role is to build multidisciplinary interactions with other groups in the university with excellent research in the Life Sciences and Interfaces.

Applicants should have a track record in a mathematical, statistical or computational aspect of biology.

Applicants are welcome from outstanding applicants at all career stages and an appointment may be made at any level up to Chair. For recruitment to senior levels, an outstanding track record of winning research funding as a principal investigator is required.

Ref: 169/08/W
Closing date: 31 January 2009

Please see : http://www.hw.ac.uk/hr/v_academic.php#16808




Posted 12/17/08

Permanent Modeller/Statistician
HPA, London

Job Title: Mathematical Modeller/Statistician

Employer: Health Protection Agency Department Statistics, Modelling and Bioinformatics Location London
Salary: £41,262-£48,683 pa
Job Type: Permanent
Closing Date: 22/12/2008
Interview Date: 12/01/2009

Mathematical Modeller/Statistician

The Health Protection Agency (HPA) is an independent body that protects the health and well-being of everyone in England and Wales. The Agency plays a critical role in protecting people from infectious diseases and in preventing harm when hazards involving chemicals, poisons or radiation occur. We also prepare for new and emerging threats, such as a bio-terrorist attack or a virulent new strain of pathogen.

We are looking for a mathematical modeller / statistician to take the lead in developing and applying models for real-time forecasting of pandemic influenza and other infections and the impact of public health interventions. A key role of the post will be to support the development of real-time modelling expertise and capacity across the wider HPA. The post holder is expected to identify opportunities for future research in liaison with scientific and medical colleagues across the HPA, and supervise scientific staff within this area. The ideal candidate will have a background in infectious disease modelling and extensive experience in applying Markov Chain Monte Carlo (MCMC) techniques. The post involves a range of complex and original scientific work and requires a high degree of personal motivation.

The post-holder will be based in the Modelling and Economics Unit at the Centre for Infections in Colindale, which is a dynamic and stimulating group comprising infectious disease modellers and health economists working on diverse projects relating to the burden of infectious disease and modelling the impact of interventions against infections.

The Centre for Infections at Colindale, NW London is an internationally renowned centre of excellence for expertise, reference and research, surveillance and epidemiology in relation to micro-organisms that affect human health. The modern purpose built centre is well equipped and staffed and provides excellent Library, Occupational Health and Refectory facilities. There is also a Nursery and Gym on Site.

The Health Protection Agency is an equal opportunities employer.

For further details, please contact Nigel Gay (email: nigel.gay@hpa.org.uk)

To apply, visit http://www.jobs.nhs.uk/cgi-bin/vacdetails.cgi?selection=912152113




Posted 12/17/08

Vacancies: Evolutionary Biodemography
Max Planck Institute

The Max Planck Institute for Demographic Research continues to develop its research activities in the field of Evolutionary Biodemography, and is recruiting to a number of positions. An announcement, linking to http://www.demogr.mpg.de/go/appl-agelife/ , will be appearing soon in Nature, Science etc., and may be of interest to you or to members of your group.




Posted 12/17/08

Tenure-track Positions
Duke University

The Duke Institute for Genome Sciences & Policy (IGSP) and the Duke University Trinity College of Arts & Sciences invite applications for tenure-track faculty positions in the areas of computational, quantitative, or systems biology. We seek applicants with strong quantitative backgrounds (for example, in computer science, mathematics or statistics) and with experience in addressing challenging questions in the life sciences, including genome biology, systems biology, evolutionary genomics, functional genomics, or modeling across biological scales. Appointees will enjoy and contribute to existing strengths in the broad areas of computational and systems biology at Duke and will be affiliated with the IGSP Center for Systems Biology, a campus-wide intellectual center supported as a National Systems Biology Center by the NIH.

A successful candidate will have a tenure-track academic appointment in a suitable department in Arts & Sciences, as well as an appointment as an Investigator in the IGSP, with the possibility for a joint appointment in other departments or schools as appropriate. While the current search is directed to faculty at the rank of Assistant Professor, exceptional candidates may be considered at more senior ranks.

Applicants should submit a curriculum vitae, a brief summary of current and proposed research, a statement of teaching interests and experience, and reprints of up to three publications via the web at www.academicjobsonline.org. Candidates should arrange for at least three letters of recommendation to be uploaded to the website. Applications received before 5 January 2009 will receive full consideration; applications after this date may be considered until positions are filled. Questions about the search may be addressed to bbooher@duke.edu; additional information may be found at www.genome.duke.edu/centers/csb/facsearch.

Duke University is an Equal Opportunity/Affirmative Action Employer; women and members of minority groups are strongly encouraged to apply.




Posted 12/17/08

Postdoc position: Comp. Biomechanics
University of Stuttgart

Opening for a Post-Doc position in Skeletal Muscle Modeling with Applications to Lumbar Spine Mechanics

The Post-Doc is supposed to work on a project focusing on developing novel computational techniques to model skeletal muscles mechanics. The goal is to overcome the computational challenge of realistically modeling lumbar spine muscle mechanics while taking into account the influence of a large number of muscles involved in complex upper body movements. The skeletal muscles are modeled using the Finite Element method in three dimensions and principles of nonlinear continuum mechanics. For this purpose, a good background in computational continuum mechanics, the Finite Element Method, and some programming skills are desirable.

Applications with the usual documents (CV, degree certificates, references, publication list, letter of motivation) should be sent directly to Jun.-Prof. Oliver Roehrle (roehrle (_AT) simtech.uni-stuttgart.de), Institute of Applied Mechanics (CE), Pfaffenwaldring 7, 70569 Stuttgart, Germany. Applications will be accepted until the position is filled.

http://www.mechbau.uni-stuttgart.de/ls2/institut/personen/r%F6hrle/PhDposition.pdf




Posted 12/17/08

Postdoc: Analysis of Signaling Networks
University of Luxembourg

Post Doc in Systems Biology (M/F)
Application End : 28 February 2009

The University of Luxembourg has a vacancy in its Faculty of Science, Technology and Communication for a:

Post Doc in Systems Biology
Fixed term contract (?Assistant-Chercheur?) 2 years, renewable
Reference: F1-080013

Research area: Analysis of Signaling Networks

Within the systems biology group mathematical models (mainly ODE based) of different mammalian signaling pathways are developed. One main focus currently lays on pro- and anti-apoptotic signaling. In addition projects concentrating on JAK/STAT and PGDFR signaling will further characterize their relevance in inflammation related diseases and cancer. Regarding the analysis of the systemic characteristics of the underlying networks, a key position of an ?Assistant-Chercheur? is open for application. This theory-trained person shall provide a profound support of the necessary analyses, e.g. focusing on global sensitivities, identifiability, robustness, modularity and others. Based on the analyses results future experimental strategies shall be suggested in close collaboration with the experimental partners.

Tasks:

Profile:

Offer:

For further information, please contact:
Prof. Thomas Sauter
University of Luxembourg
Life Sciences Research Unit
162a, avenue de la Faïenceri
L-1511 Luxembourg

Tel: +352 466644 6296
Email: thomas.sauter@uni.lu
Url : http://www.isr.uni-stuttgart.de/~sauter/

Interested candidates are asked to send their full application (letter of motivation, detailed CV, copies of diploma, photo) until February 28th, 2009 by e-mail to thomas.sauter@uni.lu.

The University of Luxembourg is an equal opportunity employer.




Posted 12/17/08

Postdoc Position
University of Oxford

POST-DOCTORAL RESEARCH POSITION IN MATHEMATICAL MODELLING OF ION CHANNELS

Oxford Centre for Collaborative Applied Mathematics (OCCAM)
Mathematical Institute, University of Oxford

Closing Date: 9 January 2009
Appointment Term: 2 years

We invite applications for a Postdoctoral research position, funded by the King Abdullah University of Science and Technology Global Research Partnership [KAUST GRP], to work with Prof. S.J. Chapman and Dr R. Erban at the newly established Oxford Centre for Collaborative Applied Mathematics (OCCAM). This position is available from 1 April 2009.

OCCAM has been established with substantial funding from the KAUST GRP. The Centre, which is part of the Mathematical Institute, is allied to a global network of mathematicians. Aiming to meet the ever-increasing global demand for quantitative understanding of complex scientific phenomena, OCCAM has been built on the strength of four pre-existing groups of applied and computational mathematicians working in Oxford: the Oxford Centre for Industrial and Applied Mathematics, the Centre for Mathematical Biology, the Numerical Analysis Group and the Computational Biology Group. It has a symbiotic relationship with other scientific communities which have a need for problem-solving mathematics both within the University of Oxford and beyond. Over the first five years the centre will employ 40 new staff and students.

Further details about the position, including the project description and selection criteria, can be obtained at http://www.maths.ox.ac.uk/node/8183

Other current vacancies at OCCAM can be found at: http://www.maths.ox.ac.uk/groups/occam/vacancies




Posted 12/17/08

Postdoc Position
University of Nottingham

A five year programme within the Centre for Plant Integrative Biology (CPIB) at the University of Nottingham aims to create a virtual root which will serve as an exemplar for using Integrative Systems Biology to model multi-cellular systems. CPIB is jointly funded by the BBSRC and EPSRC as part of their Systems Biology Initiative to establish a number of Centres for Integrative Systems Biology. This project brings together biologists, engineers, mathematicians and computer scientists to generate new data, biological resources and virtual models that will aid understanding of how plant roots grow and develop.

Applications are invited for an applied mathematician on the above Virtual Root project to undertake deterministic (differential-equation based) modelling of gene and signalling networks involved in lateral root emergence. Other duties include publication of this research in peer-reviewed journals and presentations at national and international conferences.

Candidates must have a PhD in applied mathematics or a related area. Research experience in mathematical modelling is essential and experience of multidisciplinary research is desirable. This post will require the person appointed to be able to work independently and as part of a team, to be flexible and to have good communication and interpersonal skills.

Salary will be within the range £27,183 - £35,469 per annum, depending on qualifications and experience (salary can progress to £38,757 per annum, subject to performance). This post will be offered on a fixed-term contract for a period of two years.

Informal enquiries may be addressed to Professor J King, School of Mathematical Sciences, Email: John.King@Nottingham.ac.uk. For general enquiries regarding CPIB contact Professor C Hodgman, School of Biosciences, Email: Charlie.Hodgman@Nottingham.ac.uk. Further details are available at: http://jobs.nottingham.ac.uk/.

Candidates should send a detailed CV, together with the names and addresses of two referees, to Mrs M Axinte, School of Biosciences, The University of Nottingham, Sutton Bonington Campus, Loughborough, Leicestershire, LE12 5RD. Email: Mirela.Axinte@Nottingham.ac.uk. Please quote ref. SCI/543X1. Closing date: 21 January 2009.




Posted 12/17/08

Postdoctoral Position: Modelling Cell Differentiation
University of Dundee

Postdoctoral Position
For Mathematical Modelling of Cell Differentiation during Biofilm Formation
Grade 7 (£28,839 - £35,46

The bacterium Bacillus subtilis is a single celled Gram-positive soil bacterium that can exist as part of an integrated, multicellular community called a biofilm. Biofilm formation is a complex process that depends on cell fate differentiation that occurs in spatio-temporal manner. Biofilms are important in all sectors of our economy with examples ranging from human health - they form the basis of chronic infections, to bioremediation ? they are required for the effective treatment of sewage. B. subtilis has advanced genetic and molecular biology tools ideal for studying the complex development of biofilm communities.

The appointed postdoctoral scientist will be part of an interdisciplinary team and will develop a multi-scale modelling approach to address, at the systems biology level, how biofilm formation is controlled. This will lead to a better understanding of microbial community dynamics with longer term impact on applications to health and industry.

The overall aim of this work is to better understand how perturbations to gene transcription pathways lead to changes in the macro-scale organisation and function of the biofilm. Specific objectives of the proposed work are: i) to model the interplay between key components of the gene transcription network, using a combination of deterministic (ordinary differential equations and dynamical systems theory) and stochastic techniques; ii) model large scale sub-population interactions at the biofilm-scale using partial differential equations. These modelling frameworks will ultimately be used to inform the development of novel, multi-scale modelling approach for the study of the collective behaviour of large numbers of distinct (yet interacting) individual bacteria. The modelling framework will be developed in tandem with state-of-the-art experimental techniques for studying bacterial cell fate differentiation.

This project is funded as an initiation to pump-prime interdisciplinary collaborations in Life Sciences at Dundee. It is planned to develop the ideas formulated over this time period to establish a longer term programme of funded research and suitable candidates would be well-placed to be part of this longer term plan.

Candidates should have, or be about to obtain, a PhD at the interface of mathematics and biology. The post is available for up to 12 months in the first instance and is available immediately.

Informal enquiries can be made to Dr Fordyce Davidson (Division of Mathematics) or Dr Nicola Stanley-Wall (College of Life Sciences), e-mail: fdavidso@maths.dundee.ac.uk; n.r.stanleywall@dundee.ac.uk (applications sent to either of these addresses alone will not be considered ? see below).

Applications in the form of a CV and covering letter, including the names and addresses of 3 referees, should be sent to HR-LifeSciences@dundee.ac.uk quoting LS/2505. Alternatively, please send 2 hard copies of your CV and covering letter to Human Resources, College of Life Sciences, MSI/WTB/JBC Complex, University of Dundee, DD1 5EH.

Applicants will only be contacted if invited for interview.

Closing Date: 16 January 2009




Posted 12/12/08

PhD/Postdoc position, Comp. Biomechanics
U. Stuttgart, Germany

Opening for a PhD/Post-Doc position in Skeletal Muscle Modeling with Applications to Lumbar Spine Mechanics

The PhD student/Post-Doc is supposed to work on a project focusing on developing novel computational techniques to model skeletal muscles mechanics. The goal is to overcome the computational challenge of realistically modeling lumbar spine muscle mechanics while taking into account the influence of a large number of muscles involved in complex upper body movements. The skeletal muscles are modeled using the Finite Element method in three dimensions and principles of nonlinear continuum mechanics. For this purpose, a good background in computational continuum mechanics, the Finite Element Method, and some programming skills are desirable.

The PhD position is within the designated salary bracket TV-L 13 and has a limited tenure of three years with a possible extension. The PhD student will be part of the Graduate School Simulation Technology of the Cluster of Excellence EXC 310 Simulation Technology (SimTech) at Universitaet Stuttgart Applications with the usual documents (CV, degree certificates, references, publication list, letter of motivation) should be sent directly to Jun.-Prof. Oliver Roehrle (roehrle (_AT) simtech.uni-stuttgart.de), Institute of Applied Mechanics (CE), Pfaffenwaldring 7, 70569 Stuttgart, Germany. Applications will be accepted until the position is filled.

http://www.mechbau.uni-stuttgart.de/ls2/institut/personen/r%F6hrle/PhDposition.pdf




Posted 12/12/08

Postdoc position, medical image analysis
University of Pennsylvania

A postdoctoral position is available at the Section of Biomedical Image Analysis (SBIA), of the Department of Radiology, University of Pennsylvania (http://www.rad.upenn.edu/sbia). The successful candidate must have background in Applied Math, Electrical or Biomedical Engineering, or Computer Science. Several project opportunities exist, involving work on deformable registration, segmentation, and pattern classification. SBIA has been a dynamically growing medical image analysis group, including 25 researchers and many collaborators from diverse fields and offers diverse opportunities to researchers with interests in applying math and engineering knowledge and models to the rapidly growing biomedical imaging field. Please e-mail or mail CV's to:

Christos Davatzikos
Director, Section of Biomedical Image Analysis
Professor, Radiology
Joint affiliations: Electrical and Systems Engineering, and Bioengineering
3600 Market street, Suite 380
Philadelphia, PA 19104
christos@rad.upenn.edu




Posted 12/12/08

Faculty Positions, CS/Applied Mathematics
King Abdullah University of Science and Technology

Faculty Openings in Computer Science and Applied Mathematics King Abdullah University of Science and Technology (KAUST) is being established in Saudi Arabia as an international graduate-level research university dedicated to inspiring a new age of scientific achievement that will benefit the region and the world. As an independent and merit-based institution and one of the best endowed universities in the world, KAUST intends to become a major new contributor to the global network of collaborative research. It will enable researchers from around the globe to work together to solve challenging scientific and technological problems. The admission of students, the appointment, promotion and retention of faculty and staff, and all the educational, administrative and other activities of the University shall be conducted on the basis of equality, without regard to race, color, religion or gender.

KAUST is located on the Red Sea at Thuwal (80km north of Jeddah). Opening in September 2009, KAUST welcomes exceptional researchers, faculty and students from around the world. To be competitive, KAUST will offer very attractive base salaries and a wide range of benefits. Further information about KAUST can be found at http://www.kaust.edu.sa/.

KAUST invites applications for faculty position at all ranks (Assistant, Associate, Full) in Applied Mathematics (with domain applications in the modeling of biological, physical, engineering, and financial systems) and Computer Science, including areas such as Computational Mathematics, High-Performance Scientific Computing, Operations Research, Optimization, Probability, Statistics, Computer Systems, Software Engineering, Algorithms and Computing Theory, Artificial Intelligence, Graphics, Databases, Human-Computer Interaction, Computer Vision and Perception, Robotics, and Bio-Informatics (this list is not exhaustive). KAUST is also interested in applicants doing research at the interface of Computer Science and Applied Mathematics with other science and engineering disciplines. High priority will be given to the overall originality and promise of the candidate's work rather than the candidate's sub-area of specialization within Applied Mathematics and Computer Science.

An earned Ph.D. in Applied Mathematics, Computer Science, Computational Mathematics, Computational Science and Engineering, Operations Research, Statistics, or a related field, evidence of the ability to pursue a program of research, and a strong commitment to graduate teaching are required. A successful candidate will be expected to teach courses at the graduate level and to build and lead a team of graduate students in Master’s and Ph.D. research. Applications should include a curriculum vita, brief statements of research and teaching interests, and the names of at least 3 references for an Assistant Professor position, 6 references for an Associate Professor position, and 9 references for a Full Professor position. Candidates are requested to ask references to send their letters directly to the search committee. Applications and letters should be sent via electronic mail to kaust-search@cs.stanford.edu. The review of applications will begin immediately, and applicants are strongly encouraged to submit applications as soon as possible; however, applications will continue to be accepted until December 2009, or all 10 available positions have been filled. In 2008 and 2009, as part of an Academic Excellence Alliance agreement between KAUST and Stanford University, the KAUST faculty search committee consisting of professors from the Computer Science Department and the Institute of Computational and Mathematical Engineering at Stanford University, will evaluate applicants for the faculty positions at KAUST. However, KAUST will be responsible for all hiring decisions, appointment offers, recruiting, and explanations of employment benefits. The recruited faculty will be employed by KAUST, not by Stanford. Faculty members in Applied Mathematics and Computer Science recruited by KAUST before September 2009 will be hosted at Stanford University as Visiting Fellows until KAUST opens in September 2009.




Posted 12/09/08

Faculty Position: Computational Statistics
Marquette University

The Department of Mathematics, Statistics and Computer Science at Marquette University in Milwaukee, WI USA invites applications for a tenure-track, or tenured, assistant, associate, or full professor in computational statistics starting August 2009. Qualifications include: doctorate in statistics or related field, evidence of research, commitment to seeking research funding, and commitment to teaching. The Department places emphasis on basic, applied and collaborative research, teaching, and interdisciplinary programs.

Our faculty maintain close ties with the Medical College of Wisconsin, the Zablocki VA Medical Center, Milwaukee area hospitals, the University of Wisconsin-Milwaukee, and other regional institutions and industrial partners as well as Marquette science and engineering departments.

Review begins January 5, 2008 and will continue until the position is filled. For full details, visit www.mscs.mu.edu.




Posted 12/09/08

Tenure Track Positions
University of Washington Department of Bioengineering

The Department of Bioengineering at the University of Washington is a member of both the College of Engineering and the School of Medicine. Located in the new William H. Foege building, the department is within walking distance to the UW Medical Center, the College of Engineering and the UW campus. We are embarking on an ambitious program to increase the size of our tenure-track faculty, beginning this year by offering at least two new positions. At this time we are particularly seeking extraordinarily qualified candidates with expertise in the following four thematic areas:

Other themes in the Department or future recruitment include: Imaging and Image-Guided Therapy, Analytical Biomedicine, and Learning Engineering from Biology.

Applications are sought at all levels: Assistant, Associate and Full Professor, but those at the Assistant Professor level are particularly encouraged. Ph.D. or M.D. degrees are required, and prior post-doctoral or higher level experience is highly valued. The successful candidate will be expected to develop an internationally recognized research program and to participate in the teaching and service missions of the department. Scientists and engineers who apply should show evidence of excellence, originality and productivity in research and potential for excellent teaching. Successful candidates will also attract strong support from one or more additional departments in Medicine, Engineering or the College of Arts and Sciences and will be expected to follow UW's strong tradition of collaboration across disciplinary boundaries. Candidates with interests in translational medicine are also encouraged to take advantage of our active Coulter Translational Research Partnership. More information can be found at http://depts.washington.edu/bioe.

Applications must be submitted electronically at http://www.engr.washington.edu/facsearch/?dept=BioE. Applicant review will begin December 15, 2008 and continue until the position is filled. All positions are contingent on the availability of funding.

The University of Washington is building a culturally diverse faculty and strongly encourages applications from women, minorities, individuals with disabilities and covered veterans. Faculty engage in teaching, research and service. The University of Washington is the recipient of a 2006 Alfred P. Sloan Award for Faculty Career Flexibility and a 2001 National Science Foundation ADVANCE Institutional Transformational Award to increase the advancement of women faculty in science, engineering and math. The University is an Equal Opportunity, Affirmative Action Employer.




Posted 12/09/08

Postdoctoral Research Assistant and Career Development Fellow
Centre for Mathematical Biology, University of Oxford and St Hugh's College, Oxford

Project: Multiscale modelling of cellular oscillators: applications to vertebrate segmentation and hair follicle cycling.

The Centre for Mathematical Biology (CMB) is looking to recruit a post- doctoral research assistant to work in the area of mathematical and computational modelling of coupled oscillators in biological systems. The position will be held in association with a Career Development Fellowship at St Hugh's College. More specifically, the PDRA will work alongside Dr Ruth Baker and Professor Philip Maini (CMB) and Professor Kevin Burrage (University of Oxford Computing Laboratory) to develop multi-scale models to describe the dynamics two paradigms of coupled biological oscillators: the molecular clock involved in segmentation of the vertebrate body axis and the hair follicle cycle. In either case, models consisting of systems of non-linear differential equations will be developed on the level of the individual oscillator, in tandem with phenomenological models to describe events on the tissue level. Different types of oscillator coupling, the role of noise and the integration of individual-level models into population- level models will be addressed, and there may also be the opportunity to visit experimental collaborators.

Candidates should have extensive experience in the following areas: mathematical modelling and simulation of complex biological systems; applied scientific computing; modelling coupled multi-scale systems. This role would suit individuals who have a first degree in mathematics and a PhD in mathematical modelling, show evidence of independent research, enjoy working in a team and have a meticulous approach to their work. The post-holder will be expected to carry out up to four hours teaching per week for St Hugh's College during term-time.

Further particulars may be obtained from vacancies@maths.ox.ac.uk and at http://www.maths.ox.ac.uk/notices/vacancies/.

If you have any questions or would like to discuss this position then please do not hesitate to contact me via e-mail (ruth.baker@maths.ox.ac.uk).




Posted 12/09/08

Postdoc Position
Odum School of Ecology, University of Georgia

POSTDOCTORAL RESEARCH ASSOCIATE
Odum School of Ecology, University of Georgia, USA

Applications are invited for a postdoctoral research fellowship in Mathematical Epidemiology. The position will involve developing new mathematical models and the analysis of data with a view to understanding the persistence, transmission dynamics and evolution of whooping cough in the US and UK.

A PhD in statistics, applied mathematics or a highly quantitative field is essential. Previous experience in the analysis of ecological or epidemiological systems would be desirable.

The position is for 2 years in the first instance, with a salary in the range of $35-40,000 per year (depending on experience), plus fringe benefits.

For further information about these projects, contact Pej Rohani +1 706 542 9249, e-mail: rohani@uga.edu.

Applicants should send a detailed CV, together with a brief statement of research interests and three references to Pej Rohani, Odum School of Ecology, University of Georgia, Athens GA 30602. Electronic applications are encouraged.

Review of applications will start on Jan 15 and will continue until the post has been filled.




Posted 12/09/08

Postdoc: Infectious Disease Modeler
THETA, U Toronto & U Guelph

Postdoctoral Fellow/Infectious Disease Modeler

Infectious Disease Modeling and Health Economic Evaluation of Pandemic Influenza Mitigation Strategies

A position for a postdoctoral fellow/infectious disease modeler is available at THETA, the Toronto Health Economics and Technology Assessment Collaborative - University of Toronto and the University of Guelph. The postdoctoral fellow/infectious disease modeler will collaborate with project investigators to address questions in the cost-effectiveness of preventive and therapeutic pandemic influenza mitigation strategies, including vaccination, targeted antiviral prophylaxis, treatment and social distancing measures. The postdoctoral fellow/infectious disease modeler will primarily develop, parameterize, and simulate an agent-based model of influenza transmission that projects clinical effectiveness and cost-effectiveness of mitigation strategies. The postdoctoral fellow/infectious disease modeler will also co-author manuscripts and interface with graduate students working on the project.

Major duties: In collaboration with project investigators, the postdoctoral fellow/infectious disease modeler will:

Requirements: A master's (infectious disease modeler) or doctoral degree (postdoctoral fellow) in a related quantitative field (such as mathematics, computer science, statistics, epidemiology, biology, health economics/decision science) with enthusiasm for applying these skills to real-world, policy-relevant problems is required. Demonstrated skill for programming and computing ability at a high level is required, and knowledge of C, Fortran, Java, R, Netlogo, or AnyLogic is essential. Experience in working with complex mathematical/agent-based models is highly desirable, including some or all of: model construction, debugging, simulation, validation and data collection, and policy applications. Excellent organizational, written and verbal skills are essential to success in this position, as is the ability to work independently.

We offer a competitive salary, appropriate to the level of qualifications and experience required for this position. The position may be structured as a one-year full-time or two-year part-time position, with job duties to be specified accordingly.

To express interest or apply for this position, please send a cover letter, CV, and the names and contact information for two referees to Beate Sander (beate.sander@theta.utoronto.ca). Review of applications will begin 5 January 2009 and continue until the position is filled.




Posted 12/09/08

Four Research Jobs
LORIA, Nancy, France

Research Opportunities in High Performance Algorithms for Structural Systems Biology

We have vacancies for two postdoctoral researchers, one graduate software engineer, and one PhD student to work on exciting new projects to develop high performance algorithms and knowledge-based approaches to advance the state of the art in protein-protein docking, protein shape recognition, and high throughput 3D virtual drug screening.

Location: LORIA, Nancy, France
Duration: Two years in the first instance
Starting date: January 1st 2009 (negotiable)
Remuneration: Standard INRIA rates

Candidates for the postdoc positions must have a PhD in one of the mathematical or physical sciences, and must have strong and demonstrable abilities and experience in programming using C or C++ on Unix/Linux or Windows systems. Experience of scripting languages such as Python and PHP would also be desirable. Experience of parallel programming, high performance computing, and computer graphics would be desirable but is not essential. Preference will be given to candidates with a strong interest or background in structural biology, crystallography, computational chemistry, molecular modelling, or related areas. Candidates should have a proven research track record, demonstrated by publications in peer-reviewed journals in one or more of the above areas.

Candidates for the Software Engineering position must have a good Honours or Masters degree in computing science or one of the mathematical or physical sciences, and must have very good programming skills using C or C++. Preference will be given to candidates with an interest or background in structural biology, molecular modelling, or related areas. If progress is good, the successful applicant will be encouraged to study for a PhD.

Candidates for the PhD Studentship should be qualified to Masters level or equivalent in computing science or one of the physical or biological sciences, and must have experience of programming using a procedural language such as C or C++. Preference will be given to candidates with a strong interest in the use of knowledge-based approaches and computer graphics to help advance the state of the art in protein-protein docking. This position could be filled initially by a student with a good Honours degree who would register as a Masters intern before proceeding to undertake a PhD.

For further information, please see:

http://www.csd.abdn.ac.uk/hex/loria_anr_hpassb_advert.html

Please send a detailed CV, which includes the names of two academic referees, along with a brief statement of your research interests and motivation to:

Dave Ritchie: dave.ritchie@loria.fr cc: d.w.ritchie@abdn.ac.uk

Please indicate which post(s) you are applying for. Closing date: 31 December 2008.




Posted 12/08/08

Post Doctoral Position: Integrated Mathematical Oncology
H. Lee Moffitt Comprehensive Cancer Center

Applications are sought for the position of post-doctoral research fellow to work on an exciting inter-disciplinary research project concerning the modeling of Cancer progression and development. We seek a talented individual with a PhD and background in applied mathematics, physics or a computational discipline to work in the unique research environment of the Integrated Mathematical Oncology (IMO) division. The division combines mathematicians, computer scientists, and imaging specialists as well as clinical and experimental oncologists focused on developing novel approaches for the treatment and understanding of cancer.

The successful candidate will have experience in modeling biological systems, with a preference for medical applications using a variety of modeling techniques. As well as demonstrated creativity, high motivation, good communication skills and importantly, experience in developing/writing publications in peer reviewed high impact scientific journals. They should possess the ability to work independently and within the research group. A good understanding of biology and the desire to work closely with experimentalists and clinicians is also necessary. Preference will be given to candidates with the ability to program (C/C++/Java/Matlab), visualise and analyse numerical/experimental data.

The IMO is housed within the H. Lee Moffitt Comprehensive Cancer Center which is a modern facility on the University of South Florida Campus that conducts research on various aspects of Cancer Biology with emphasis on translational research. Research environment includes state of the art modern core facilities and access to experimental and clinical data.

Please navigate to the IMO website (http://www.moffitt.org/imo) and click on Jobs for further information on how to apply. If you have any questions or would like to discuss this position then please do not hesitate to contact me via email (alexander.anderson@moffitt.org)




Posted 12/08/08

Postdoc: Computational Neuroscience
LSUHSC Neuroscience Center

An NIH-funded postdoctoral position in computational neuroscience is immediately available at the LSUHSC Neuroscience Center in New Orleans. The project consists of modeling the generation of the firing pattern in midbrain dopaminergic neurons in close collaboration with electrophysiologists using patch clamp and dynamic clamp techniques. The lab has an established research program in oscillations and synchrony, and the dopaminergic neuron will be modeled as a system of coupled oscillators.

Applicants should be fluent in spoken and written English and have a PhD or equivalent in mathematics, engineering, physics, neuroscience or a related field. Previous experience in some of the following areas is recommended: the NEURON simulation package, C programming, Unix, and linear and nonlinear systems theory, as is the ability and desire to acquire the remaining skills. Candidates who are in a position to join the lab within the next few months are particularly encouraged to apply.

Please send CV to Dr. Carmen Canavier at ccanav@lsuhsc.edu. LSUHSC/NO is AA/EOE Employer.




Posted 12/08/08

Clinical Research Data Manager
Reset Medical

I direct clinical and translational research for a fast-growing medical device company focused on minimally invasive spray cryotherapy technologies. Though we are based in Baltimore, MD, I am casting a wide net for this particular career opportunity, which might be appropriate for a bioinformatics MS student who is interested in clinical research.

As I am currently growing my pulmonary research team, I am seeking a clinical research data manager (job description here) who is interested in creating and maintaining the informatics infrastructure for our current and future clinical trials, which include both treatment protocols as well as patient registries for longitudinal studies. If there is anyone you can recommend or think would be interested in this project, I would appreciate your forwarding this email with the attached job description.

Thank you in advance for your assistance and wishing you success in all your endeavours,

Ethel Rubin, PhD
Chief Science Officer

CSA Medical
Reset Medical
1101 E. 33rd Street, suite E305
Baltimore, MD 21218

443-524-9694 (office)
866-300-5183 (fax)
erubin@resetmed.com




Posted 11/26/08

Faculty Position: Engineering Sci & Applied Math
Northwestern University

Northwestern University's Department of Engineering Sciences and Applied Mathematics invites applications for a full-time faculty position to begin in September 2009. Requirements include a Ph.D. and demonstrated ability to conduct high-impact interdisciplinary research in applied mathematics with focus on applications in engineering and/or the sciences. Duties involve teaching and research. Candidates at all levels are encouraged to apply, but preference will be given to junior level candidates (to be hired as tenure-track assistant professors). To ensure full consideration, applicants should apply online at http://esam.northwestern.edu by January 2, 2009, providing their curriculum vitae and a statement of research interests. At least three letters of recommendation should be sent directly to:

Search Committee Chai
Dept. of Engineering Sciences and Applied Mathematics
2145 Sheridan Road
Northwestern University
Evanston, IL 60208

Northwestern University is an Affirmative Action, Equal Opportunity Employer. Women and minorities are encouraged to apply. Hiring is contingent upon eligibility to work in the United States.




Posted 11/26/08

Tenure-track Position: Ecology & Evolution
University of Chicago

Quantitative Population / Community Biologist

The Department of Ecology & Evolution at The University of Chicago is seeking to fill a tenure track faculty position with an individual whose research emphasizes quantitative, computational or modeling approaches to understanding ecological and evolutionary processes.

The successful candidate will demonstrate innovation in addressing fundamental questions at the core of ecology and/or evolution, with preference given to individuals who bridge these fields. Rank is open, although candidates at the level of ASSISTANT PROFESSOR are especially encouraged to apply. Interested applicants must have a PhD and should submit a CV, 5 selected reprints or preprints, and statements of research and teaching interests to https://ecolevol.uchicago.edu. Applicants should also arrange for three letters of reference to be submitted to this site. Applications will be accepted until the position is filled, but applications and letters must be received before 15 January 2009 to ensure full consideration. The University of Chicago is an Affirmative Action/Equal Opportunity Employer.




Posted 11/26/08

Tenure-track Position: Mathematical Biology
Utah State University

The Department of Mathematics and Statistics at Utah State University seeks an Assistant Professor of Applied Mathematics who will extend and enhance Utah State University?s interdisciplinary research and education programs in mathematical and biological sciences (broadly interpreted). The position is a 9-month, tenure track position in mathematical biology/ecology (a departmental research emphasis). Postdoctoral experience is preferred; a PhD in Mathematics, Applied Mathematics or related discipline is required. The candidate will receive tenure in the Math Department but will be expected to interact with existing, and develop new, interdisciplinary teams, particularly in the Department of Biology, College of Science, departments in the College of Natural Resources, and the University-wide Ecology Center. Duties within the department include teaching graduate and undergraduate classes in applied mathematics (some subset of methods of applied mathematics, partial differential equations, nonlinear dynamics, asymptotic analysis, numerical methods, stochastic processes, applied math in biology) and supervising research students in the industrial/interdisciplinary masters program and the interdisciplinary PhD program.

We are particularly interested in applicants who are excited about opportunities to interact with some of the quantitatively oriented bioscientists on campus, including (but not limited to): Peter Adler(Wild), Michelle Baker (Biology), Barbara Bentz (USDA Forest Service), Mary Conner (Wildland Resources), Todd Crowl (Watershed Sciences), Tom Edwards (USGS/Wildland Resources), Jim Haefner (Biology), Mevin Hooten (Statistics/Wildland Resources), David Koons (Wildland Resources), Keith Mott (Biology), Mike Pfrender (Biology), James Powell (Mathematics/Biology), Ethan White (Biology), Wayne Wurtsbaugh (Watershed Sciences). Utah State University has an excellent climate for interdisciplinary research, with a history of interdisciplinary education and grantsmanship. The candidate?s publications in biological and ecological journals will count with equal weight toward tenure as those in mathematical or statistical journals. The candidate will assist in building and delivering quantitative courses serving Biology, Natural Resource and Ecology Center students as well as the quantitative ecology emphasis being initiated this year.

Candidates should submit a cover letter, three letters of recommendation, and curriculum on USU?s employment website (https://jobs.usu.edu). At least one of the letters should address teaching qualifications. A separate, brief (two pages or less) statement of research interests and capabilities, indicating how the candidate envisions enhancing an interdisciplinary research programs in quantitative biology and ecology, must also be submitted. Full position and application details appear on the USU employment website.

Utah State University is an AA/EOE employer, sensitive to the needs of dual-career applicants. The University was recently chosen as a National Science Foundation ADVANCE Gender Equity Program recipient. Utah State has made a number of successful dual-career appointments and is dedicated to recruiting stellar candidates from a diverse pool including women, minorities, veterans and people with disabilities. The university offers competitive salaries with outstanding medical, retirement and professional benefits ( http://personnel.usu.edu ). USU is in Logan, Utah, a semi-rural city in an Alpine mountain valley with a community of 100,000 people, offering ample opportunities for family-friendly professional life. Local ski resorts, lakes, rivers, and mountains create an excellent recreation environment.

Applicants should apply at https://jobs.usu.edu (Req. ID 051575). Details about requirements for the application process are explained on this site. A Quick Link for applicants is:

http://jobs.usu.edu/applicants/Central?quickFind=53822

Review of applications begins January 12, 2009, with the position open until filled. Email inquiries should be directed to jim.powell@usu.edu.




Posted 11/26/08

Postdoc Opportunity
Pacific Biological Station, British Columbia

Genomics Tools for Fisheries Management

Applications are invited for an exciting, multidisciplinary postdoctoral fellowship to develop novel, quantitative approaches for integrating genomics, physiology, environmental and fisheries data into Pacific salmon management models.

The successful candidate must hold a PhD in quantitative fisheries or ecological modeling, and have a strong background in parameter estimation, Bayesian statistics, and programming with ADMB, R, or an equivalent language. Applicants should be creative and demonstrate how their previous research has helped develop or refine conceptual or applied fisheries management tools. In addition, valuable assets include previous experience with stock assessment of Pacific salmon; knowledge of epidemiology, salmon life histories, fish physiology, oceanography, climate change impacts in the northeast Pacific, or the socio-economic dimensions of fisheries management; and experience with bioinformatics or database management.

The researcher must have a demonstrated ability to work effectively within a multidisciplinary team, and communicate their research through publications and oral presentations to audiences with a quantitative fisheries or ecology background. This Genome BC-funded project "Genomics Tools for Fisheries Management" http://www.genomebc.ca/genomics_programs/research_projects/agip/fisheries_management.htm is led by a highly collaborative team based at the Pacific Biological Station (Kristi-Miller Saunders, Janelle Curtis) and the University of British Columbia (Anthony Farrell, Scott Hinch, Paul Pavlidis, Paul Wood). Our team also works closely with colleagues at the Pacific Salmon Commission, Fisheries and Oceans Canada (DFO), Carleton University and the National Oceanic and Atmospheric Administration (NOAA). Responsibilities of the postdoctoral fellow will include developing and evaluating novel approaches for incorporating genomics information into pre-season forecast and in-season management adjustment models for wild Pacific salmon stocks. The postdoctoral fellow will have opportunities to work closely with several other postdoctoral fellows and PhD students working on the genomics, physiology, bioinformatics, and social sciences aspects of this 3-year project. For some background on this long-term collaborative research program, see Cooke SJ, Hinch SG, Farrell AP, et al. 2008. Developing a mechanistic understanding of fish migrations by linking telemetry with physiology, behaviour, genomics and experimental biology: an interdisciplinary case study on adult Fraser River sockeye salmon. Fisheries 33: 321-338.

Funding for this position is available for 2 years, starting in June 2008. Qualified applicants will be invited to submit applications for a Visiting Fellowship (VF) from the Natural Sciences and Engineering Research Council of Canada (NSERC). For more information on eligibility and the NSERC VF application process, please visit the following websites:

http://www.nserc.ca/sf_e.asp?nav=vfaward&lbi=award_toc
http://www.nserc.gc.ca/sf_e.asp?nav=sfnav&lbi=3d
http://www.nserc.gc.ca/sf_e.asp?nav=vfnav&lbi=elig
http://www.nserc.ca/forms/instructions/200/e.asp

To express interest or apply for this position, please send a cover letter, CV, and the names and contact information for three referees to Janelle Curtis (email: janelle.curtis@dfo-mpo.gc.ca; fax: 250-756-7053). Review of applications will begin 30 November 2008 and continue until the position is filled.




Posted 11/26/08

Postdoctoral Positions
University of New South Wales

The Complex Systems in Biology Group at the University of new South Wales is seeking applicants for two positions as post-doctoral fellow. The group works in INFECTION and IMMUNITY, and the projects offer a variety of areas from ODE modelling, simulation, biostatistics, bioinformatics etc. The applicant should have a PhD in mathematics / physics / computer science / engineering or related discipline.

The Complex Systems in Biology Group is within the Faculty of Medicine, and currently comprises two post-docs, four PhD students, and two research assistants. It works closely with experimental collaborators to analyse and model experimental data in infection and immunity. The group has a strong history of retraining physicists / mathematicians to work in mathematical biology, and welcomes applicants with no background in biology if they have a strong publication record in their own discipline. The group currently holds seven grants and has published 14 papers in 2008, and is looking for enthusiastic post-docs to join the team. The University is well situated close to the city and within 1 km of the beaches. The positions are available to 31 December 2010, pending further funding. Further details of the group are available at: http://www.cvr.net.au/research/complex.htm

Full details of the position will be published on the UNSW website http://www.unsw.edu.au/ , and formal applications must be through this site.




Posted 11/18/08

Head: Modelling & Economics Unit
Centre for Infections, Colindale

Job title:    Head of the Modelling and Economics Unit
Division:    Centre for Infections, Colindale
Department:    Biological Mathematics and Informatics Department
Salary:    £56,163-£68,274 pa
Grade:    AFC 8c
Location:    Colindale, NW London
Date:    27/11/2008
Interview Date:    12/12/2008

The Health Protection Agency (HPA) is an independent body that protects the health and well-being of everyone in England and Wales. The Agency plays a critical role in protecting people from infectious diseases and in preventing harm when hazards involving chemicals, poisons or radiation occur. We also prepare for new and emerging threats, such as a bio-terrorist attack or virulent new strains of pathogens.

The Centre is seeking to appoint a high calibre Head of the Modelling and Economic Unit. The Unit consists of a small core team of talented staff who together in collaboration with staff within and outside the Centre provide outputs that are crucial in informing national policy regarding the effectiveness and cost-effectiveness of planned interventions aimed at controlling infectious disease. The successful candidate will provide leadership and support for the work currently being undertaken within the Unit and have a remit to expand the modelling and economic activities for those infectious diseases that are currently not provided for.

This post would suit either a health economist or a mathematical modeller, the successful candidate will be expected to have a national or international reputation in one of these disciplines.

The Centre for Infections at Colindale, NW London is an internationally renowned centre of excellence for expertise, reference microbiology, research, surveillance and epidemiology in relation to human health, working directly and indirectly at the local, regional, national and international level. The modern purpose built centre is well equipped and provides excellent Library, Occupational Health and Refectory facilities. There is also a Nursery and Gym on site.

For an informal discussion please contact Andre Charlett on 0208 327 7700

The Health Protection Agency is an equal opportunities employer.

Further details and a job description:
http://www.jobs.nhs.uk/cgi-bin/vacdetails.cgi?selection=912130319




Posted 11/18/08

Tenure-track Positions: Computational Biology
University of Colorado at Boulder

The University of Colorado at Boulder invites applications for two tenure-track faculty positions in the broad areas of computational biology and bioinformatics, under the auspices of the Colorado Initiative in Molecular Biotechnology (cimb.colorado.edu). Individuals with interests in developing and applying computational or mathematical methods to biological systems are encouraged to apply.

CIMB is a program that integrates faculty from the departments of Applied Mathematics; Chemical & Biological Engineering; Chemistry & Biochemistry; Computer Science; Ecology and Evolutionary Biology; Integrative Physiology; Mechanical Engineering; Molecular, Cellular & Developmental Biology; and Physics. A successful candidate may be rostered in any one of these departments. The positions are at the Assistant Professor level, although outstanding senior candidates at higher ranks may be considered. Candidates must have a Ph.D. degree and a demonstrated commitment to teaching at undergraduate and graduate levels, and will be expected to develop an internationally recognized research program.

Applicants should submit a curriculum vitae, statements of research and teaching interests, and arrange to have three letters of reference electronically to: ttps://www.jobsatcu.com, posting #805756. Review of applications will begin on or about December 1, 2008 and will continue until the position is filled. For more information or assistance in submission of materials, contact Janice McClintock (Janice.Mcclintock@colorado.edu). The University of Colorado is sensitive to the needs of dual career couples, and is committed to diversity and equality in education and employment. See http://www.Colorado.edu/ArtsSciences/Jobs/ for full job description.




Posted 11/18/08

Tenure-track Position: Applied Mathematics
University of Colorado at Boulder

Posting Description: The Department of Applied Mathematics is seeking to fill the full-time tenure-track position of Assistant Professor of Applied Mathematics to begin August 2009. The Department of Applied Mathematics strives to provide excellent teaching, research, and service to the university community and to the world in the application of mathematics to other disciplines. Areas of research expertise within the department include Analysis, Computational Mathematics, Dynamical Systems, Mathematical Biology, Nonlinear Phenomena, Physical Applied Mathematics, Statistics and Applied Probability. For more information see http://amath.colorado.edu/.

Job Responsibilities: The teaching load in the Department of Applied Mathematics is three courses per academic year. Faculty members are expected to teach both undergraduate and graduate courses. Equal weight is placed on research and teaching. Required Qualifications: A Ph.D. in Applied Mathematics or related discipline is required.

Preferred Qualifications: Preference is given to candidates with outstanding research and teaching records and whose portfolio combines Applied Mathematics with Analysis, Computational Mathematics, Geosciences, or Mathematical Biology. However, outstanding candidates with research potential in any Applied Mathematics discipline will be considered. Post Ph.D. academic training is highly desired. Strong written and oral communication skills and excellent interpersonal skills are required.

Special Instructions to Applicants: Letters of recommendation are accepted at jobsatcu.com and mathjobs.org (minimum of three are required - at least one should address applicant's teaching). The cover letter should be the AMS Standard Cover Sheet (http://www.ams.org/employment/covertemplate.doc). Other required documents include a statement of research, a statement on teaching, and a list of references.

Job Posting Contact:
Tom Manteuffel
Telephone: 303-492-5199
Email: tmanteuf@colorado.edu
Job Posting Number: 805412




Posted 11/18/08

Postdoc Position: Modeling Complex Microbial Systems
University of Guelph

We invite applications for a Postdoc Position at the University of Guelph in "Mathematical modeling of complex microbial communities" as part of an interdisciplinary research project with government scientists (Health Canada; Agriculture and Agrifood Research Canada), pending on final approval of funds. The begin of the project is to some extent negotiable, with a preference on early 2009.

The incumbent should possess:

The postdoctoral fellow will join the Computational Biomathematics Laboratory (lead by Dr Hermann J Eberl, Assoc. Prof and Canada Research Chair) within the Department of Mathematics and Statistics. The research group currently is composed of one faculty, one postdoctoral fellow, and eight graduate students. The main research area of the group is mathematical modeling of microbial systems; other currently active research areas are modeling in apiculture, forest dynamics, and social dynamics. For more information see http://www.uoguelph.ca/~heberl

Guelph is located centrally in Southern Ontario, about one hour west of Toronto. The University of Guelph is Canada's leading comprehensive research university with a long tradition in the Life Sciences. Biomathematics and Statistics is the largest research area in the Dept. of Mathematics and Statistics with currently about 10 research active faculty and 25 grad students.

Interested individuals are invited to send their electronic application (pdf or ps format preferred) to Dr. Hermann J Eberl at heberl@uoguelph.ca, to whom also informal inquiries can be directed. An application should include: